The functions listed below can all be accessed using the fluent dollar notation (ie. fit$abundances[1:3,1:3]) without any additional parentheses.

# S4 method for proDAFit
abundances(object)

# S4 method for proDAFit
design(object, formula = FALSE)

# S4 method for proDAFit
hyper_parameters(object)

# S4 method for proDAFit
feature_parameters(object)

# S4 method for proDAFit
coefficients(object)

# S4 method for proDAFit
coefficient_variance_matrices(object)

# S4 method for proDAFit
reference_level(object)

# S4 method for proDAFit
convergence(object)

Arguments

object

the 'proDAFit' object

formula

specific argument for the design function to get the formula that was used to create the linear model. If no formula was used NULL is returned.

Value

See the documentation of the generics to find out what each method returns